STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XYD2WD40 repeat-like protein. (365 aa)    
Predicted Functional Partners:
A0A1Y1ZCL3
TRASH domain-containing protein.
   
 
 0.980
A0A1Y1Z1K2
Brix-domain-containing protein.
   
 
 0.956
A0A1Y1YB02
RNA helicase.
   
 
 0.949
A0A1Y1Y4Y9
Brix-domain-containing protein.
   
 
 0.945
A0A1Y1YNU4
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.944
A0A1Y1ZB62
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.942
A0A1Y1XUL7
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.938
A0A1Y1XZ00
Eukaryotic rRNA processing.
   
 
 0.935
A0A1Y1XU22
Brix-domain-containing protein.
   
 
 0.934
A0A1Y1ZA78
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.933
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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