STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XYE3Putative oxidoreductase. (306 aa)    
Predicted Functional Partners:
A0A1Y1Y5E9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.821
A0A1Y1YKY7
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.808
A0A1Y1YC55
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.753
A0A1Y1XUK4
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.745
A0A1Y1XVK9
Nucleoporin2-domain-containing protein.
    
 0.740
A0A1Y1Y842
Nucleoporin2-domain-containing protein.
    
 0.740
A0A1Y1ZCJ2
Peptidase S59 domain-containing protein.
    
 0.740
A0A1Y1XT69
Uncharacterized protein.
   
 0.734
A0A1Y1YI71
Uncharacterized protein.
   
 0.734
A0A1Y1YEY0
Tryptophan synthase.
    
 0.728
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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