STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Y4F8P-loop containing nucleoside triphosphate hydrolase protein. (530 aa)    
Predicted Functional Partners:
A0A1Y1YBN4
RNB-domain-containing protein.
   
 
 0.972
A0A1Y1WTL9
OB_Dis3 domain-containing protein.
   
 
 0.878
A0A1Y1XMZ0
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 
 0.878
A0A1Y1XYZ0
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 
 0.878
A0A1Y1YD99
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 
 0.878
A0A1Y1Z1X4
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 
 0.878
A0A1Y1Y732
Metallo-hydrolase/oxidoreductase.
   
  
 0.795
A0A1Y1YI54
Metallo-hydrolase/oxidoreductase.
   
  
 0.795
A0A1Y1YE72
Putative PEP8-vacuolar protein sorting/targeting protein.
 
   
 0.751
A0A1Y1XTA2
Pet127-domain-containing protein.
    
 
 0.648
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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