STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Y5H4Uncharacterized protein. (1797 aa)    
Predicted Functional Partners:
A0A1Y1YFB4
Uncharacterized protein.
    
 
 0.923
A0A1Y1YFE9
Uncharacterized protein.
    
 
 0.923
A0A1Y1Y377
Uncharacterized protein.
   
 
 0.912
A0A1Y1Z3J7
G-patch domain-containing protein.
   
 
 0.912
A0A1Y1Y383
MT-A70-domain-containing protein; Belongs to the MT-A70-like family.
    
 
 0.751
A0A1Y1YAV1
Uncharacterized protein; Belongs to the MT-A70-like family.
    
 
 0.668
A0A1Y1YSX2
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
    
 
 0.560
A0A1Y1Z9L0
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
    
 
 0.516
A0A1Y1YTW0
HECT domain-containing protein.
   
 
 0.510
A0A1Y1Y701
YTH-domain-containing protein.
    
 
 0.474
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.