STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Y688P-loop containing nucleoside triphosphate hydrolase protein. (842 aa)    
Predicted Functional Partners:
A0A1Y1Z7T0
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 0.987
A0A1Y1Y3F9
Diphthami_syn_2 domain-containing protein.
   
 0.986
A0A1Y1X7G4
30S ribosomal protein S6.
  
 
 0.984
A0A1Y1YSL2
Uncharacterized protein.
  
 
 0.983
A0A1Y1XVE7
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.982
A0A1Y1XS09
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.981
A0A1Y1ZDD8
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.981
A0A1Y1XTA5
Ribosomal protein S16.
  
 
 0.980
A0A1Y1ZB25
Ribosomal protein L19.
  
 
 0.979
A0A1Y1YCH5
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.978
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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