STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YCV3Transcription factor IIA, alpha/beta subunit. (283 aa)    
Predicted Functional Partners:
A0A1Y1ZD44
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.992
K493DRAFT_432
TBP-domain-containing protein.
   
 0.987
A0A1Y1XZK5
Uncharacterized protein.
   
 0.979
A0A1Y1Y855
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.978
A0A1Y1WPG7
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.975
A0A1Y1Z2W4
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.975
A0A1Y1Z0T8
TFIIB-domain-containing protein.
   
 0.972
A0A1Y1Z6U2
Cyclin-like protein.
   
 0.972
A0A1Y1YNF2
DNA repair helicase rad25.
    
 0.971
A0A1Y1X3A0
TFIIE beta domain-containing protein.
    
 0.966
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.