STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YI74Concanavalin A-like lectin/glucanase. (381 aa)    
Predicted Functional Partners:
A0A1Y1Y6N8
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.720
A0A1Y1YE72
Putative PEP8-vacuolar protein sorting/targeting protein.
    
 
 0.713
A0A1Y1YXY1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.642
A0A1Y1XUZ5
Uncharacterized protein.
   
 0.610
A0A1Y1Y1C0
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.610
A0A1Y1YNL4
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.610
A0A1Y1XX48
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.588
A0A1Y1XSH6
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.556
A0A1Y1X4I7
Sortilin.
    
 0.502
A0A1Y1Y0A4
Sortilin.
    
 0.502
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.