STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YMC1Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A1Y1ZB25
Ribosomal protein L19.
   
 
 0.999
A0A1Y1XTA5
Ribosomal protein S16.
   
 
 0.998
A0A1Y1XVT4
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.998
A0A1Y1Z3I6
MRP-L47-domain-containing protein.
   
 
 0.998
A0A1Y1ZDD8
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.998
A0A1Y1YS59
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.997
A0A1Y1YSL2
Uncharacterized protein.
   
 
 0.997
A0A1Y1Y0N2
Uncharacterized protein.
   
 
 0.996
A0A1Y1YPC4
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.996
A0A1Y1YX67
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.995
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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