STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (431 aa)    
Predicted Functional Partners:
A0A1Y1YLI2
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.985
A0A1Y1ZAB0
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.985
A0A1Y1VSJ5
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.814
A0A1Y1YJY5
Uncharacterized protein.
    
 0.814
A0A1Y1XLL2
STN1_2 domain-containing protein.
    
 0.807
A0A1Y1Z7U3
Replication protein A, subunit RPA32.
    
 0.807
A0A1Y1Y127
dUTP diphosphatase.
    
 0.776
A0A1Y1Y8R0
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.776
A0A1Y1Y7G6
DNA repair endonuclease XPF.
    
 0.732
A0A1Y1XU73
WD40 repeat-like protein.
    
 0.729
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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