STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Z404Uncharacterized protein. (882 aa)    
Predicted Functional Partners:
A0A1Y1Z984
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.855
A0A1Y1YNV7
Uncharacterized protein.
   
 0.845
A0A1Y1Y7T2
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.844
A0A1Y1YLI2
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.841
A0A1Y1ZAB0
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.841
A0A1Y1YBB3
UBC-like protein.
    
 0.813
A0A1Y1ZAE5
RNA polymerase Rpb6.
   
 0.806
A0A1Y1XTZ9
DDT domain-containing protein.
   
 0.801
A0A1Y1YRW5
Uncharacterized protein.
  
0.775
A0A1Y1Z867
YL1_C domain-containing protein.
    
 0.774
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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