STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Z6S9Nop-domain-containing protein. (501 aa)    
Predicted Functional Partners:
A0A1Y1Y0S1
Nop-domain-containing protein.
  
0.997
A0A1Y1YPW8
BP28CT domain-containing protein.
   
 0.996
A0A1Y1YRQ1
WD40 repeat-like protein.
   
 0.995
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
  
 0.994
A0A1Y1Y7S7
WD40 repeat-like protein.
   
 0.993
A0A1Y1ZD67
Utp21-domain-containing protein.
   
 0.992
A0A1Y1Y2X1
NUC189-domain-containing protein.
   
 0.991
A0A1Y1Y799
WD40 repeat-like protein.
   
 0.991
A0A1Y1YMC9
U3 small nucleolar RNA-associated protein 15.
   
 0.991
A0A1Y1YNF3
NUC189-domain-containing protein.
   
 0.991
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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