STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Z951Transcription initiation factor TFIID subunit 6. (443 aa)    
Predicted Functional Partners:
A0A1Y1VVI4
TAFII28-like protein.
    
 0.999
A0A1Y1XAA2
TFIID-18kDa-domain-containing protein.
    
 0.999
A0A1Y1XTX0
TFIID-31kDa-domain-containing protein.
   
 0.999
A0A1Y1Y3X2
TAFII55_N domain-containing protein.
    
 0.999
A0A1Y1Y4F5
Uncharacterized protein.
    
 0.999
A0A1Y1YP52
BTP domain-containing protein.
    
 0.999
A0A1Y1YR21
Uncharacterized protein.
    
 0.999
A0A1Y1YRP4
WD40 repeat-like protein.
   
 0.999
A0A1Y1Z0H5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
K493DRAFT_432
TBP-domain-containing protein.
   
 0.999
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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