STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K493DRAFT_1042WD40 repeat-like protein. (447 aa)    
Predicted Functional Partners:
A0A1Y1XYH7
CPSF_A domain-containing protein.
    
 0.972
A0A1Y1Y0A7
DNA damage-binding protein 1-like protein.
    
 0.972
A0A1Y1XN74
COP9 signalosome complex subunit 6-like protein.
    
  0.856
A0A1Y1Z4L8
PCI-domain-containing protein.
    
  0.851
A0A1Y1Z851
PCI domain-containing protein.
    
  0.836
A0A1Y1YXL3
WD40 repeat-like protein.
     
 0.820
A0A1Y1XYM9
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.814
A0A1Y1Y0T4
Ubiquitin-protein ligase, cullin 4; Belongs to the cullin family.
    
 0.814
A0A1Y1YEM4
Cullin 4; Belongs to the cullin family.
    
 0.814
A0A1Y1Y0J3
WD40 repeat-like protein.
     
 0.812
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.