STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZDF2SPX-domain-containing protein. (794 aa)    
Predicted Functional Partners:
A0A1Y1XXV5
Malonyl-CoA decarboxylase.
    
 0.737
A0A1Y1XY35
MCD-domain-containing protein.
    
 0.737
A0A1Y1WQC8
Amino acid transporter.
    
 0.633
A0A1Y1X314
Amino acid transporter.
    
 0.633
A0A1Y1X890
Amino acid transporter.
    
 0.633
A0A1Y1X981
Amino acid transporter.
    
 0.633
A0A1Y1Y1E6
Amino acid transporter.
    
 0.633
A0A1Y1YLM6
Amino acid transporter.
    
 0.633
A0A1Y1YME9
Amino acid transporter.
    
 0.633
A0A1Y1YQN1
Amino acid transporter.
    
 0.633
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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