STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZE33Tfb4-domain-containing protein. (362 aa)    
Predicted Functional Partners:
A0A1Y1WPG7
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
A0A1Y1XWZ5
Uncharacterized protein.
    
 0.999
A0A1Y1YED3
DNA repair helicase.
    
 0.999
A0A1Y1YNF2
DNA repair helicase rad25.
    
 0.999
A0A1Y1Z2W4
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.999
A0A1Y1XUP5
CDK-activating kinase assembly factor.
    
 0.998
A0A1Y1YRG2
Cyclin-like protein; Belongs to the cyclin family.
   
 0.998
A0A1Y1Z1Y8
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.998
A0A1Y1Y855
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.997
A0A1Y1XXG6
Uncharacterized protein.
    
 0.992
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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