STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B7MS20NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)    
Predicted Functional Partners:
A0A1B7NFR0
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 
 0.867
A0A1B7NIN5
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.782
A0A1B7MMC3
Uncharacterized protein.
    
 
 0.677
A0A1B7N5C1
Ras-domain-containing protein.
    
 
 0.677
A0A1B7NDX8
COX15-CtaA-domain-containing protein.
   
 0.657
A0A1B7MQ83
Ferredoxin.
   
 0.633
A0A1B7MQ88
Uncharacterized protein.
   
 0.633
A0A1B7MMM8
Ubiquitin-like protein.
    
 
 0.614
A0A1B7N082
Ubiquitin-like protein.
    
 
 0.614
A0A1B7N0K2
RING-type domain-containing protein.
   
 
 0.596
Your Current Organism:
Rhizopogon vinicolor
NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026
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