STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B7MUW7RECA_2 domain-containing protein. (174 aa)    
Predicted Functional Partners:
A0A1B7NFU1
Ribonuclease H-like protein.
   
 0.993
A0A1B7N9T8
RECA_2 domain-containing protein.
   
 0.969
A0A1B7NHE0
Uncharacterized protein.
    
 0.958
A0A1B7MV96
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.942
A0A1B7N5E9
BRCA-2_OB1 domain-containing protein.
   
 0.935
A0A1B7N7M7
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.899
A0A1B7NHD1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.899
A0A1B7NCN8
Rad51-domain-containing protein.
   
 0.896
A0A1B7NCP2
Rad51-domain-containing protein.
   
 0.896
A0A1B7NCT1
RECA_3 domain-containing protein.
   
 0.896
Your Current Organism:
Rhizopogon vinicolor
NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026
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