STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B7MXB0Amino acid transporter. (540 aa)    
Predicted Functional Partners:
A0A1B7MMP7
Fe2OG dioxygenase domain-containing protein.
    
 0.671
A0A1B7MUK6
Glycoside hydrolase family 13 protein.
    
 0.671
A0A1B7N3Y0
Glycoside hydrolase family 13 protein.
    
 0.671
A0A1B7N9S9
Glycoside hydrolase family 13 protein.
    
 0.671
A0A1B7NDM8
Uncharacterized protein.
    
 0.671
A0A1B7NIJ0
Glycoside hydrolase family 13/glycosyltransferase family 5 protein.
    
 0.671
A0A1B7MR78
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.588
A0A1B7NEW8
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.511
A0A1B7N228
Pseudouridine synthase.
    
   0.476
A0A1B7NIP0
Putative rRNA pseudouridine synthase.
    
   0.476
Your Current Organism:
Rhizopogon vinicolor
NCBI taxonomy Id: 1314800
Other names: R. vinicolor AM-OR11-026, Rhizopogon vinicolor AM-OR11-026
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