STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK22482.1COG1846 Transcriptional regulators. (135 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
       0.868
AMK22481.1
NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
       0.868
AMK22483.1
COG0260 Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.685
AMK23547.1
COG1560 Lauroyl/myristoyl acyltransferase.
  
    0.568
thrB
COG2334 Putative homoserine kinase type II (protein kinase fold); Belongs to the pseudomonas-type ThrB family.
  
    0.557
AMK25547.1
MucR family transcriptional regulator.
  
   
 0.477
AMK21726.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.473
AMK20990.1
COG1466 DNA polymerase III, delta subunit.
  
 
   0.466
AMK25087.1
Putative ubiquinol-cytochrome c chaperone.
  
     0.461
AMK23186.1
MucR-family transcriptional regulator.
  
   
 0.446
Your Current Organism:
Sphingobium sp. TKS
NCBI taxonomy Id: 1315974
Other names: S. sp. TKS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.