STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK24960.1FeS assembly SUF system protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. (154 aa)    
Predicted Functional Partners:
AMK24961.1
Cysteine desulfurase SufS subfamily protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.975
AMK24962.1
SufBD protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
   
 0.972
AMK24963.1
COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
  
 0.968
AMK24966.1
Cysteine desulfurase activator complex subunit SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
   
 0.908
AMK24959.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
  
 0.887
AMK23804.1
Nitrogen-fixing NifU domain-containing protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
    0.846
AMK22948.1
ABC transporter-like protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
  
 0.793
AMK24958.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
     
 0.773
AMK24965.1
COG2852 Uncharacterized protein conserved in bacteria.
       0.771
AMK24964.1
Hypothetical protein.
       0.742
Your Current Organism:
Sphingobium sp. TKS
NCBI taxonomy Id: 1315974
Other names: S. sp. TKS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.