STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENSUB_9457BTB/POZ domain-containing protein 1. (1642 aa)    
Predicted Functional Partners:
PENSUB_2649
Cullin-3; Belongs to the cullin family.
    
 0.853
PENSUB_13396
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.851
PENSUB_13989
Uncharacterized protein.
    
 0.851
PENSUB_13167
Nucleoporin NSP1.
   
 0.847
PENSUB_9674
Cullin-1; Belongs to the cullin family.
    
 0.818
PENSUB_10406
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.808
PENSUB_10348
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
    
   0.781
PENSUB_7975
Diphthamide biosynthesis protein 4.
    
 
 0.762
PENSUB_6917
Histone H2A; Belongs to the histone H2A family.
    
 0.753
PENSUB_819
G2-specific protein kinase nimA.
    
 0.706
Your Current Organism:
Penicillium subrubescens
NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens
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