STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENSUB_8508F-box domain-containing protein. (537 aa)    
Predicted Functional Partners:
PENSUB_13755
RING-box protein 1.
    
 0.874
PENSUB_11756
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.810
PENSUB_9674
Cullin-1; Belongs to the cullin family.
    
 0.810
PENSUB_2649
Cullin-3; Belongs to the cullin family.
    
 0.810
PENSUB_1536
54S ribosomal protein RML2, mitochondrial.
    
 0.794
PENSUB_13719
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.768
PENSUB_11894
Uncharacterized protein.
    
 0.768
PENSUB_11643
Uncharacterized protein.
    
 0.768
PENSUB_1294
Vegetative incompatibility protein HET-E-1.
    
 0.768
PENSUB_4518
Ubiquitin-like protein 1.
    
 0.763
Your Current Organism:
Penicillium subrubescens
NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.