STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENSUB_5049Regulatory protein brlA. (179 aa)    
Predicted Functional Partners:
PENSUB_1880
Regulatory protein abaA.
    
 0.895
PENSUB_3263
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.819
PENSUB_13330
Serine/threonine-protein kinase cek1.
    
 0.793
PENSUB_2181
Cell pattern formation-associated protein stuA.
    
 0.774
PENSUB_9158
Actin, gamma.
    
 0.702
PENSUB_12995
Nitrate reductase [NADH] 1.
    
 0.669
PENSUB_12371
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.660
PENSUB_6397
Histone H3; Belongs to the histone H3 family.
    
 0.658
PENSUB_212
Transcription factor of morphogenesis MCM1.
    
 0.657
PENSUB_909
GATA zinc finger domain-containing protein 10.
    
 0.648
Your Current Organism:
Penicillium subrubescens
NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens
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