STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENSUB_2390ASTRA-associated protein 1. (284 aa)    
Predicted Functional Partners:
PENSUB_13836
Zinc finger CCCH domain-containing protein 45.
    
 0.886
PENSUB_9600
Mitotic spindle checkpoint component mad2.
   
 0.844
PENSUB_223
Pre-rRNA-processing protein ipi1.
   
 0.842
PENSUB_2664
Checkpoint serine/threonine-protein kinase bub1.
   
 0.835
PENSUB_10400
G2/mitotic-specific cyclin-4; Belongs to the cyclin family.
   
 0.833
PENSUB_7564
Transcription initiation factor TFIID subunit 6.
    
 0.833
PENSUB_6280
Transcription initiation factor TFIID subunit 9.
    
 0.833
PENSUB_3833
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.833
PENSUB_3008
Transcription initiation factor TFIID subunit 12.
   
 0.833
PENSUB_1535
G2/mitotic-specific cyclin-B; Belongs to the cyclin family.
   
 0.833
Your Current Organism:
Penicillium subrubescens
NCBI taxonomy Id: 1316194
Other names: CBS 132785, CBS H-21029, DTO 188-D6, IBT 31985, P. subrubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.