Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| ATO4_00235 | ATO4_05132 | Hypothetical protein. | COG5622 Protein required for attachment to host cells. | 0.430 |
| ATO4_00540 | ATO4_05132 | COG2261 Predicted membrane protein. | COG5622 Protein required for attachment to host cells. | 0.436 |
| ATO4_00540 | ATO4_26372 | COG2261 Predicted membrane protein. | COG4991 Uncharacterized protein with a bacterial SH3 domain homologue. | 0.696 |
| ATO4_04527 | ATO4_05132 | Hypothetical protein. | COG5622 Protein required for attachment to host cells. | 0.437 |
| ATO4_05132 | ATO4_00235 | COG5622 Protein required for attachment to host cells. | Hypothetical protein. | 0.430 |
| ATO4_05132 | ATO4_00540 | COG5622 Protein required for attachment to host cells. | COG2261 Predicted membrane protein. | 0.436 |
| ATO4_05132 | ATO4_04527 | COG5622 Protein required for attachment to host cells. | Hypothetical protein. | 0.437 |
| ATO4_05132 | ATO4_05137 | COG5622 Protein required for attachment to host cells. | Spore-cortex-lytic enzyme prepeptide; COG3773 Cell wall hydrolyses involved in spore germination. | 0.457 |
| ATO4_05132 | ATO4_05439 | COG5622 Protein required for attachment to host cells. | HWE histidine kinase; COG3920 Signal transduction histidine kinase. | 0.497 |
| ATO4_05132 | ATO4_09731 | COG5622 Protein required for attachment to host cells. | Sodium/calcium exchanger membrane protein; COG0530 Ca2+/Na+ antiporter. | 0.487 |
| ATO4_05132 | ATO4_10859 | COG5622 Protein required for attachment to host cells. | Hypothetical protein. | 0.450 |
| ATO4_05132 | ATO4_15151 | COG5622 Protein required for attachment to host cells. | Phospholipase; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily. | 0.448 |
| ATO4_05132 | ATO4_18799 | COG5622 Protein required for attachment to host cells. | Hypothetical protein. | 0.518 |
| ATO4_05132 | ATO4_26372 | COG5622 Protein required for attachment to host cells. | COG4991 Uncharacterized protein with a bacterial SH3 domain homologue. | 0.542 |
| ATO4_05137 | ATO4_05132 | Spore-cortex-lytic enzyme prepeptide; COG3773 Cell wall hydrolyses involved in spore germination. | COG5622 Protein required for attachment to host cells. | 0.457 |
| ATO4_05439 | ATO4_05132 | HWE histidine kinase; COG3920 Signal transduction histidine kinase. | COG5622 Protein required for attachment to host cells. | 0.497 |
| ATO4_09731 | ATO4_05132 | Sodium/calcium exchanger membrane protein; COG0530 Ca2+/Na+ antiporter. | COG5622 Protein required for attachment to host cells. | 0.487 |
| ATO4_10859 | ATO4_05132 | Hypothetical protein. | COG5622 Protein required for attachment to host cells. | 0.450 |
| ATO4_15151 | ATO4_05132 | Phospholipase; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily. | COG5622 Protein required for attachment to host cells. | 0.448 |
| ATO4_15151 | ATO4_18799 | Phospholipase; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily. | Hypothetical protein. | 0.426 |
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