STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO4_18099COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (339 aa)    
Predicted Functional Partners:
ATO4_12880
Urea ABC transporter permease; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.960
ATO4_18164
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.925
ATO4_18124
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.924
ATO4_18109
Urea/short-chain amide ABC transporter; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.886
ATO4_12576
Antitermination protein; COG3707 Response regulator with putative antiterminator output domain.
 
 
 0.884
ATO4_18119
Branched-chain amino acid ABC transporter ATP-binding protein; COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
  
 0.872
ATO4_02845
Urea ABC transporter permease UrtC; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.867
ATO4_18114
Urea/short-chain amide ABC transporter; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.866
ATO4_02850
Urea ABC transporter permease UrtB; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.856
ATO4_12875
Urea ABC transporter, permease protein UrtC; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.831
Your Current Organism:
Aurantimonas sp. 22II1619i
NCBI taxonomy Id: 1317114
Other names: A. sp. 22II-16-19i, Aurantimonas sp. 22II-16-19i
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