STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_00480HAD family hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. (261 aa)    
Predicted Functional Partners:
ATO7_13513
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.878
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
  0.852
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.835
ATO7_15757
COG3954 Phosphoribulokinase.
 
     0.757
ATO7_14258
COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
 
  
 0.726
ATO7_07200
Group 1 glycosyl transferase; COG3551 Uncharacterized protein conserved in bacteria.
    
 0.713
ATO7_13578
Putative sucrose phosphorylase; COG0366 Glycosidases.
  
 
 0.694
ATO7_12008
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.637
ATO7_04870
Hydrolase; COG1011 Predicted hydrolase (HAD superfamily); contains a phosphatase-like domain; HAD-superfamily hydrolase subfamily IA, variant 3.
   
 0.593
ATO7_00365
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.562
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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