STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_00515ABC transporter substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (346 aa)    
Predicted Functional Partners:
ATO7_00510
COG1178 ABC-type Fe3+ transport system, permease component.
 
 0.999
ATO7_00505
Putative ABC transporter ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.996
ATO7_06925
Sensory transduction protein kinase AlgZ; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
   
   0.912
ATO7_00520
Hypothetical protein; COG0672 High-affinity Fe2+/Pb2+ permease.
       0.791
ATO7_03640
Sugar phosphate permease; COG0477 Permeases of the major facilitator superfamily.
  
  
 0.650
ATO7_09337
Bifunctional maltose ABC transporter ATP-binding protein/phenotypic repressor of mal operon; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.621
ATO7_00980
ABC transporter periplasmic protein.
   
    0.614
ATO7_09642
Hypothetical protein; COG0748 Putative heme iron utilization protein.
   
    0.587
ATO7_11248
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG0748 Putative heme iron utilization protein.
   
    0.587
ATO7_01360
COG0492 Thioredoxin reductase.
   
  
 0.585
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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