STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_00840Rieske (2Fe-2S) domain-containing protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. (370 aa)    
Predicted Functional Partners:
ATO7_01840
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.818
ATO7_14888
Oxidoreductase FAD-binding domain-containing protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.801
ATO7_13663
Flavodoxin reductase-like protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.797
ATO7_00835
COG1309 Transcriptional regulator.
    
  0.792
ATO7_10612
Modular polyketide synthase; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
    
 0.651
ATO7_09732
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
 
 
 0.640
ATO7_11048
Monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 
 0.459
ATO7_00830
Hypothetical protein; COG3000 Sterol desaturase.
       0.409
ATO7_02025
3-oxosteroid-delta-1-dehydrogenase; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
  
 0.409
ATO7_11028
Rubredoxin-type Fe(Cys)4 protein; COG1773 Rubredoxin.
  
 
 0.403
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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