STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_00975COG3656 Predicted periplasmic protein. (175 aa)    
Predicted Functional Partners:
ATO7_00970
Plasmolipin; COG3295 Uncharacterized protein conserved in bacteria.
   
 0.993
ATO7_00980
ABC transporter periplasmic protein.
 
  
 0.973
ATO7_00985
Oxidoreductase; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
 
     0.917
ATO7_00965
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.763
ATO7_09772
COG3182 Uncharacterized iron-regulated membrane protein.
 
  
 0.603
ATO7_00990
COG1977 Molybdopterin converting factor, small subunit.
       0.566
ATO7_00995
COG0314 Molybdopterin converting factor, large subunit.
       0.566
ATO7_12838
COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
  
    0.540
ATO7_13563
Hypothetical protein; COG4240 Predicted kinase.
  
     0.506
ATO7_10667
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.485
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.