STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01025Sulfatase; COG3119 Arylsulfatase A and related enzymes. (587 aa)    
Predicted Functional Partners:
ATO7_01010
Sulfatase-modifying factor protein.
 
 
   0.936
ATO7_01020
Ribonuclease Z; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
 
   
 0.750
ATO7_11608
Beta-lactamase domain-containing protein; COG2015 Alkyl sulfatase and related hydrolases.
 
   
 0.620
ATO7_01015
COG0625 Glutathione S-transferase.
 
     0.595
ATO7_01005
Steryl-sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
    
0.590
ATO7_10307
Hypothetical protein.
   
   0.578
ATO7_10612
Modular polyketide synthase; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
 
 0.559
ATO7_11148
Hypothetical protein.
    
 0.546
ATO7_07457
COG0183 Acetyl-CoA acetyltransferase.
  
    0.541
ATO7_05580
Hypothetical protein.
  
 0.534
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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