STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01505FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (406 aa)    
Predicted Functional Partners:
ATO7_09167
Nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.979
ATO7_09157
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 0.975
ATO7_05635
rubredoxin--NAD(+) reductase; COG1773 Rubredoxin.
  
 0.903
ATO7_11028
Rubredoxin-type Fe(Cys)4 protein; COG1773 Rubredoxin.
  
 0.858
ATO7_15972
COG2906 Bacterioferritin-associated ferredoxin.
  
 
 0.841
ATO7_02250
Ferredoxin, 2Fe-2S; COG0633 Ferredoxin.
 
 
  0.700
ATO7_15642
COG0633 Ferredoxin.
 
 
  0.686
ATO7_01335
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
    
  0.683
ATO7_07432
COG0633 Ferredoxin.
 
 
  0.665
ATO7_06545
COG0174 Glutamine synthetase.
    
 0.659
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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