STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01580Hypothetical protein. (148 aa)    
Predicted Functional Partners:
ATO7_01585
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.815
ATO7_01605
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.759
ATO7_11818
Hypothetical protein.
  
     0.739
ATO7_01590
Hypothetical protein.
       0.737
ATO7_01595
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.716
ATO7_01600
Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
       0.716
ATO7_02680
Hypothetical protein.
 
     0.704
ATO7_08922
Hypothetical protein.
  
     0.685
ATO7_03500
LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins.
  
     0.640
ATO7_03495
Steroid delta-isomerase; COG0176 Transaldolase.
 
     0.638
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.