STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01895Hypothetical protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. (371 aa)    
Predicted Functional Partners:
ATO7_10182
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.927
ATO7_01890
Hypothetical protein.
       0.773
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
     
 0.717
ATO7_07722
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.717
ATO7_08792
Acyltransferase, WS/DGAT/MGAT.
  
     0.589
ATO7_00500
Polyhydroxyalkonate synthesis repressor, PhaR; COG5394 Uncharacterized protein conserved in bacteria.
 
   
 0.588
ATO7_12368
Acyltransferase, WS/DGAT/MGAT subfamily protein; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase.
  
     0.560
ATO7_10812
Acyltransferase.
  
     0.557
ATO7_00195
Diacylglycerol O-acyltransferase; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
     0.523
ATO7_01900
Hypothetical protein; COG0720 6-pyruvoyl-tetrahydropterin synthase.
       0.523
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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