STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01975Hypothetical protein. (268 aa)    
Predicted Functional Partners:
motB
COG1360 Flagellar motor protein.
  
 0.991
ATO7_11943
Response regulator receiver; COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.960
ATO7_02295
Flagellar protein FlgJ (peptidoglycan hydrolase); COG3951 Rod binding protein.
  
  
 0.864
ATO7_02140
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.860
ATO7_02340
Response regulator receiver modulated CheW protein; COG0835 Chemotaxis signal transduction protein.
  
  
 0.846
ATO7_02065
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
  
 0.838
ATO7_02170
Flagellar protein; COG1516 Flagellin-specific chaperone FliS.
  
  
 0.838
ATO7_02135
Flagellar assembly protein FliH; COG1317 Flagellar biosynthesis/type III secretory pathway protein.
  
  
 0.837
flgK
COG1256 Flagellar hook-associated protein.
  
  
 0.837
ATO7_02330
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.837
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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