STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_01990Hypothetical protein. (261 aa)    
Predicted Functional Partners:
ATO7_01980
Hypothetical protein.
       0.773
ATO7_01985
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.773
ATO7_01995
Hypothetical protein.
       0.773
ATO7_01965
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.678
ATO7_01970
Hypothetical protein.
       0.678
ATO7_01975
Hypothetical protein.
       0.678
ATO7_01960
COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.610
ATO7_02000
Permease; COG0701 Predicted permeases.
       0.543
ATO7_02005
poxB regulator PoxA; COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II).
       0.437
efp
Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.
       0.437
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.