STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_02395Hypothetical protein. (77 aa)    
Predicted Functional Partners:
ATO7_02400
Hypothetical protein.
 
     0.851
ATO7_02405
Hypothetical protein.
       0.697
ATO7_12758
COG3151 Uncharacterized protein conserved in bacteria.
  
     0.688
ATO7_15203
Cytochrome oxidase assembly protein, Sco1/SenC family.
 
    0.677
ATO7_15198
Hypothetical protein.
 
    0.593
ATO7_15173
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.588
ATO7_15208
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
     0.518
ATO7_00465
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.483
ATO7_01215
Hypothetical protein.
  
     0.482
ATO7_02410
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.466
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.