STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_02475Ompa/motb domain-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (491 aa)    
Predicted Functional Partners:
motB
COG1360 Flagellar motor protein.
  
 
 0.742
ATO7_02480
Hypothetical protein.
   
  0.680
ATO7_08132
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  
 
0.669
ATO7_00055
OmpA/MotB domain-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  
 
0.656
ATO7_07997
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  
 
0.647
ATO7_10827
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  
 
0.642
ATO7_08127
OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  
 
0.639
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.628
tolB-2
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.566
ATO7_02485
Putative beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.535
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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