STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_02725Hypothetical protein. (675 aa)    
Predicted Functional Partners:
ATO7_02730
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
     0.948
ATO7_02735
Hypothetical protein.
 
     0.945
ATO7_03620
Hypothetical protein.
  
     0.720
ATO7_03460
Hypothetical protein.
  
     0.684
ATO7_02680
Hypothetical protein.
  
     0.670
ATO7_08692
Hypothetical protein.
  
     0.655
ATO7_00530
Hypothetical protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase.
  
     0.648
ATO7_02720
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.644
ATO7_15158
Rieske family iron-sulfur cluster-binding protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
     0.636
ATO7_03495
Steroid delta-isomerase; COG0176 Transaldolase.
  
     0.623
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.