STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_02730Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. (303 aa)    
Predicted Functional Partners:
ATO7_02725
Hypothetical protein.
 
     0.948
ATO7_02735
Hypothetical protein.
 
     0.947
ATO7_12928
Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.664
ATO7_02720
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
   0.613
ATO7_03460
Hypothetical protein.
  
     0.602
ATO7_03620
Hypothetical protein.
  
     0.589
ATO7_02715
Hypothetical protein.
       0.580
ATO7_01015
COG0625 Glutathione S-transferase.
 
 
   0.571
ATO7_02225
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
  
 
   0.564
ATO7_07532
Hypothetical protein; COG0625 Glutathione S-transferase.
  
 
   0.530
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.