STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_03010Cation efflux protein; COG1230 Co/Zn/Cd efflux system component. (213 aa)    
Predicted Functional Partners:
ATO7_03025
COG1538 Outer membrane protein.
 
   
 0.893
ATO7_03015
Cation efflux system protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.842
ATO7_03020
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein.
 
     0.839
ATO7_03040
Cation diffusion facilitator family transporter; COG1230 Co/Zn/Cd efflux system component.
 
     0.806
ATO7_03005
Adenylate cyclase; COG0607 Rhodanese-related sulfurtransferase.
    
  0.774
ATO7_09102
Cobalt/zinc/cadmium efflux RND transporter outermembrane protein; COG1538 Outer membrane protein.
 
   
 0.452
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
   
  
 0.435
ATO7_03030
Hypothetical protein.
       0.414
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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