STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_03220COG0631 Serine/threonine protein phosphatase. (277 aa)    
Predicted Functional Partners:
ATO7_03215
Serine/threonine protein kinase; COG4252 Predicted transmembrane sensor domain.
 0.977
ATO7_14248
Cyclic nucleotide-binding protein; COG0515 Serine/threonine protein kinase.
 0.955
ATO7_03225
FHA domain-containing protein; COG1716 FOG: FHA domain.
 
   
 0.949
ATO7_00280
COG0515 Serine/threonine protein kinase.
 0.941
ATO7_04430
COG0515 Serine/threonine protein kinase.
 0.893
ATO7_07587
COG0515 Serine/threonine protein kinase.
 
 0.891
ATO7_07837
Serine/threonine protein kinase; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.888
ATO7_15402
COG0515 Serine/threonine protein kinase.
 0.887
ATO7_06680
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
  
 0.877
ATO7_05550
COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.
    
 0.795
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.