STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_04130Hypothetical protein. (518 aa)    
Predicted Functional Partners:
ATO7_11283
Hypothetical protein; COG2272 Carboxylesterase type B.
  
 0.752
ATO7_04125
Hypothetical protein; COG2346 Truncated hemoglobins.
       0.545
ATO7_04135
COG3544 Uncharacterized protein conserved in bacteria.
       0.524
ATO7_01770
Phospholipase D/transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.513
ATO7_07772
Putative cardiolipin synthase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
    
  0.513
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.474
metH-2
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
     
 0.474
ATO7_03280
HflC protein; HflC and HflK could regulate a protease.
    
  0.436
ATO7_03285
HflK protein; HflC and HflK could encode or regulate a protease.
    
  0.436
ATO7_04270
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
    
  0.436
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.