STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_04470Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ATO7_04475
Hypothetical protein.
 
     0.885
ATO7_04465
Hypothetical protein.
 
     0.866
ATO7_04480
Peptidase M16 domain-containing protein; COG0612 Predicted Zn-dependent peptidases.
       0.491
ATO7_04485
Hypothetical protein.
       0.491
trmL
tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.491
ATO7_07617
Fenitrothion hydrolase FedB.
  
     0.475
ATO7_02395
Hypothetical protein.
  
     0.438
ATO7_11293
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.417
ATO7_04450
Hydrolase; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold.
       0.410
ATO7_04455
N-acetyl-anhydromuranmyl-L-alanine amidase; COG3023 Negative regulator of beta-lactamase expression.
       0.410
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.