STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_06430Short chain dehydrogenase; COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes. (668 aa)    
Predicted Functional Partners:
ATO7_10612
Modular polyketide synthase; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
 0.992
ATO7_10607
COG3321 Polyketide synthase modules and related proteins; Belongs to the P-Pant transferase superfamily.
  
 0.879
ATO7_12368
Acyltransferase, WS/DGAT/MGAT subfamily protein; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase.
 
 
 0.879
ATO7_00195
Diacylglycerol O-acyltransferase; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.877
ATO7_06445
PGAP1 family protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.824
ATO7_06440
COG1309 Transcriptional regulator.
 
  
  0.819
gltB
COG0067 Glutamate synthase domain 1.
    
  0.770
ATO7_08792
Acyltransferase, WS/DGAT/MGAT.
 
   
 0.763
ATO7_02715
Hypothetical protein.
 
   
 0.761
ATO7_10812
Acyltransferase.
 
   
 0.761
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.