STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_06665Heat shock protein DnaJ-like protein; COG1076 DnaJ-domain-containing proteins 1. (259 aa)    
Predicted Functional Partners:
ATO7_00585
Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 
 0.994
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.949
ATO7_00580
HesB-like protein; Belongs to the HesB/IscA family.
  
 
 0.827
erpA
Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.827
ATO7_01315
COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.743
ATO7_10737
Nucleotidyl transferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
    0.677
ATO7_00590
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; overlaps another CDS with the same product name.
  
 
 0.666
ATO7_00595
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; overlaps another CDS with the same product name.
  
 
 0.666
ATO7_10742
COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
      0.621
ATO7_06655
COG2086 Electron transfer flavoprotein, beta subunit.
       0.542
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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