STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_07467Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (242 aa)    
Predicted Functional Partners:
ATO7_07447
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.748
ATO7_07452
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.733
ATO7_10612
Modular polyketide synthase; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
   
 0.636
ATO7_07457
COG0183 Acetyl-CoA acetyltransferase.
 
  
  0.623
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.538
ATO7_01015
COG0625 Glutathione S-transferase.
  
     0.477
ATO7_07462
COG1960 Acyl-CoA dehydrogenases.
       0.460
ATO7_07382
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.431
ATO7_11868
Alcohol dehydrogenase zinc-binding domain-containing protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
    
  0.424
ATO7_07437
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.423
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.