STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_07647G-D-S-L lipolytic protein; COG2755 Lysophospholipase L1 and related esterases. (233 aa)    
Predicted Functional Partners:
ATO7_11563
COG5492 Bacterial surface proteins containing Ig-like domains.
   
 0.655
ATO7_13533
LigB-like protein.
   
 0.655
ATO7_07657
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
    0.638
ATO7_07652
FG-GAP repeat-containing protein.
       0.603
ATO7_07662
Hypothetical protein.
       0.556
ATO7_03165
Ig domain protein group 1 domain protein.
  
 
  0.548
ATO7_08662
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
     0.547
ATO7_12268
RmlD substrate binding domain superfamily protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
     0.533
ATO7_08657
Flavin-containing monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
  
     0.455
ATO7_12263
Flavin-containing monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
  
     0.448
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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