STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_07927Diguanylate cyclase; COG3452 Predicted periplasmic ligand-binding sensor domain. (493 aa)    
Predicted Functional Partners:
ATO7_05650
cyclic-di-GMP regulatory protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.995
ATO7_01630
Response regulator receiver modulated diguanylate phosphodiesterase; COG0784 FOG: CheY-like receiver.
 
 0.994
ATO7_00890
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.990
ATO7_09477
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain; COG2199 FOG: GGDEF domain.
 
 0.990
ATO7_03420
EAL and cyclic nucleotide-binding domain-containing protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 0.986
ATO7_14723
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG0784 FOG: CheY-like receiver.
 
 0.984
ATO7_14883
GacS/BarA family sensor protein; COG0642 Signal transduction histidine kinase.
 0.984
ATO7_05850
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 0.983
ATO7_05655
COG0642 Signal transduction histidine kinase.
 0.982
ATO7_12633
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 0.982
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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