STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_09507Protein containing nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain; COG0388 Predicted amidohydrolase. (335 aa)    
Predicted Functional Partners:
gltB
COG0067 Glutamate synthase domain 1.
    
 0.899
ATO7_09502
Hypothetical protein.
 
     0.820
ATO7_02575
Bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; COG1056 Nicotinamide mononucleotide adenylyltransferase; Belongs to the Nudix hydrolase family.
    
 0.766
ATO7_06095
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.744
ATO7_13248
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.734
ATO7_11193
SH3 type 3 domain-containing protein.
  
     0.728
ATO7_14558
Hypothetical protein; COG0006 Xaa-Pro aminopeptidase.
 
 
  0.696
ATO7_11088
COG2258 Uncharacterized protein conserved in bacteria.
  
     0.663
ATO7_10612
Modular polyketide synthase; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
 
  
 0.637
ATO7_09527
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
     0.624
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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